ChExVis

Results for PDB structure: 1G4A (with probe radius: 0.00Å)
Please cite the paper ChExVis: a tool for molecular channel extraction and visualization if you are using results from this server.

Click on any table row below to view the corresponding channel.
Pores

Rank	Pt 1	Pt 2	Length	Bottle-neck	Straightness	Score
1	1	11	100.089	2.972	0.972	0.827
2	2	9	187.317	1.772	0.883	0.821
3	3	8	187.317	1.771	0.883	0.821
4	4	10	187.311	1.771	0.883	0.821
5	4	12	179.615	2.010	0.800	0.806
6	4	9	187.312	1.772	0.832	0.804
7	2	8	187.320	1.771	0.832	0.804
8	3	10	187.313	1.771	0.832	0.804
9	4	11	149.543	2.306	0.848	0.801
10	2	11	149.548	2.306	0.844	0.799
11	3	11	149.545	2.306	0.834	0.796
12	3	9	187.314	1.772	0.759	0.780
13	4	8	187.315	1.771	0.759	0.780
14	2	10	187.316	1.771	0.759	0.780
15	3	6	162.047	2.306	0.695	0.772
16	2	5	162.048	2.306	0.695	0.772
17	4	7	162.041	2.306	0.695	0.772
18	2	12	179.620	2.010	0.606	0.741
19	1	8	137.861	1.771	0.904	0.740
20	1	10	137.858	1.771	0.904	0.740
21	1	9	137.858	1.772	0.904	0.740
22	3	12	179.617	2.010	0.595	0.737
23	7	11	69.732	3.051	0.807	0.727
24	6	11	69.732	3.050	0.807	0.726
25	5	11	69.735	3.050	0.807	0.726
26	3	5	162.045	2.306	0.550	0.724
27	4	6	162.045	2.306	0.550	0.724
28	2	7	162.046	2.306	0.550	0.724
29	6	7	88.154	3.050	0.634	0.701
30	5	7	88.150	3.050	0.634	0.701
31	5	6	88.155	3.050	0.634	0.701
32	3	7	97.543	2.306	0.785	0.687
33	4	5	97.541	2.306	0.785	0.687
34	2	6	97.545	2.306	0.785	0.687
35	6	9	112.542	1.772	0.840	0.674
36	7	8	112.537	1.771	0.840	0.674
37	5	10	112.533	1.771	0.840	0.674
38	5	12	104.135	2.010	0.800	0.672
39	1	5	112.589	2.972	0.426	0.667
40	1	7	112.587	2.972	0.426	0.667
41	1	6	112.591	2.972	0.426	0.667
42	1	12	130.161	2.010	0.626	0.660
43	2	4	93.786	2.051	0.721	0.631
44	2	3	93.789	2.051	0.721	0.631
45	3	4	93.780	2.051	0.721	0.631
46	8	12	127.037	1.771	0.580	0.613
47	5	9	108.846	1.772	0.645	0.602
48	6	8	108.837	1.771	0.645	0.602
49	7	10	108.827	1.771	0.645	0.602
50	7	9	107.492	1.772	0.625	0.593
51	5	8	107.492	1.771	0.625	0.593
52	6	10	107.486	1.771	0.625	0.593
53	11	12	66.838	2.010	0.747	0.588
54	6	12	99.801	2.010	0.546	0.579
55	8	9	87.542	1.771	0.642	0.563
56	8	10	87.536	1.771	0.642	0.563
57	9	10	87.539	1.771	0.642	0.563
58	1	4	66.544	2.306	0.526	0.546
59	1	3	66.546	2.306	0.525	0.546
60	1	2	66.550	2.306	0.525	0.546
61	9	11	43.775	1.772	0.787	0.534
62	8	11	43.769	1.771	0.787	0.534
63	10	11	43.767	1.771	0.787	0.534
64	9	12	124.127	1.772	0.322	0.522
65	10	12	101.155	1.771	0.238	0.453
66	7	12	97.358	2.010	0.115	0.431

Trans-membrane Pores

Rank	Out Pt	In Pt	Length	Bottle-neck	Straightness	Score
1	3	3	189.864	1.968	0.549	0.843
2	4	1	189.857	1.968	0.549	0.843
3	2	2	189.862	1.967	0.549	0.843
4	2	5	152.280	2.007	0.722	0.841
5	4	4	152.272	2.007	0.722	0.841
6	4	5	145.726	2.007	0.686	0.818
7	3	4	145.725	2.007	0.686	0.818
8	2	1	189.862	1.968	0.450	0.810
9	4	3	189.862	1.968	0.450	0.810
10	3	2	189.859	1.967	0.450	0.810
11	5	1	140.353	1.771	0.786	0.803
12	5	5	124.643	1.771	0.754	0.764
13	5	4	125.471	1.771	0.734	0.759
14	1	5	91.455	2.007	0.783	0.755
15	1	4	91.452	2.007	0.783	0.755
16	3	5	122.144	2.007	0.594	0.746
17	2	4	122.148	2.007	0.594	0.746
18	3	1	126.157	1.968	0.587	0.744
19	2	3	126.156	1.968	0.587	0.744
20	4	2	126.152	1.967	0.587	0.744
21	5	3	136.654	1.771	0.586	0.729
22	5	2	135.306	1.771	0.460	0.685
23	1	3	140.408	1.968	0.273	0.664
24	1	1	140.403	1.968	0.272	0.664
25	1	2	140.403	1.967	0.272	0.664

3D Channel view in JSMol

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Channel properties

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