Molecular channel detection in macromolecules.

Rakesh Malviya
ME Thesis


Study of molecular interaction and investigation of binding sites can solve many open questions in biochemistry and molecular biology. Molecular channels are paths leading to the binding sites or paths traversed by ions and solvent molecules through the macromolecule. Behavior of protein molecule depends on these channels. We have proposed a new algorithm which uses regular triangulation of atoms to find molecular channels.